AGBL4-IT1

RNA expression — cross-omics
Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AGBL4-IT1 RNA expression is significantly associated with the protein abundance of many other proteins, with 6,827 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible AGBL4-IT1-associated proteins across cancer lineages are BBS7, DYNC2H1, and EFCAB7. Each is linked with AGBL4-IT1 in more than 3 cancer types. Because this analysis shows association rather than direction, both AGBL4-IT1-to-partner and partner-to-AGBL4-IT1 results are reported.

Each partner links to its own Q-omics profile.

RNA expression associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (AGBL4-IT1→partner) and Y-score (partner→AGBL4-IT1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCBBS7 →+0.340+1.042<.001<.00134
LSCCDYNC2H1 →+0.452+0.757<.001<.00134
GBMEFCAB7 →+0.365+1.185<.001<.00134
LUADFSCN1 →-0.382-0.913.006.00134
HNSCGSPT2 →+0.530+0.884<.001<.00134
LSCCIFT122 →+0.292+0.631<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest of 6,827 associations by consensus.

Exploration