AGBL1

mutation — cross-omics
Cross-omicsMUTATION → RNACell-linePairwise association · TCGA cohorts

Across TCGA cell cohorts, AGBL1 mutation is significantly associated with the RNA expression of many other genes, with 472 significant associations in total. LARGE_INTESTINE shows the largest number of these associations.

The most reproducible AGBL1-associated genes across cancer lineages are CEP76, GAR1, and DHX15. Each is linked with AGBL1 in more than 1 cancer types. Because this analysis shows association rather than direction, both AGBL1-to-partner and partner-to-AGBL1 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, CEP76 grouped by AGBL1-low versus AGBL1-high in LARGE_INTESTINE.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AGBL1→partner) and Y-score (partner→AGBL1) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LARGE_INTESTINECEP76 →+0.533+1.949.005.00232
LARGE_INTESTINEGAR1 →+0.523+2.350<.001.00832
LARGE_INTESTINEDHX15 →+0.405+2.459.003.00632
LARGE_INTESTINEDDX6 →+0.403+2.526.005.00232
LARGE_INTESTINESTAG1 →+0.562+1.949<.001.00232
LARGE_INTESTINENAPG →+0.530+1.949.001.00232
Each partner links to its Q-omics profile. Showing the 6 strongest of 472 associations by consensus.

CEP76 by AGBL1 expression — LARGE_INTESTINE

Box plot of CEP76 in AGBL1-low vs AGBL1-high samples in LARGE_INTESTINE.

Explore this box plot interactively →

Exploration