AEBP2

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, AEBP2 protein abundance is significantly associated with the RNA expression of many other genes, with 7,417 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible AEBP2-associated genes across cancer lineages are MSH6, POLR2D, and FAM83D. Each is linked with AEBP2 in more than 2 cancer types. Because this analysis shows association rather than direction, both AEBP2-to-partner and partner-to-AEBP2 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, AEBP2 versus MSH6 in LSCC, with a Pearson correlation of 0.44.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (AEBP2→partner) and Y-score (partner→AEBP2) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCMSH6 →+0.889+0.503<.001<.00133
LUADPOLR2D →+0.647+0.635<.001.00433
UCECFAM83D →+2.135+0.741<.001.00432
UCECASF1B →+1.901+0.613<.001.00932
UCECANKRD27 →+0.697+0.805.004.00232
UCECPPIF →+0.797+0.516.008.00132
Each partner links to its Q-omics profile. Showing the 6 strongest of 7,417 associations by consensus.

AEBP2 vs MSH6 — LSCC

Per-sample scatter of AEBP2 vs MSH6 in LSCC (Pearson r = 0.44).

Explore this scatter interactively →

Exploration