ACVR2A

mutation — cross-omics
Cross-omicsMUTATION → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ACVR2A mutation is significantly associated with the RNA expression of many other genes, with 3,964 significant associations in total. UCEC shows the largest number of these associations.

The most reproducible ACVR2A-associated genes across cancer lineages are RN7SL134P, RPL35AP3, and MFFP3. Each is linked with ACVR2A in more than 3 cancer types. Because this analysis shows association rather than direction, both ACVR2A-to-partner and partner-to-ACVR2A results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, RN7SL134P grouped by ACVR2A-low versus ACVR2A-high in CESC.

mutation associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ACVR2A→partner) and Y-score (partner→ACVR2A) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CESCRN7SL134P →+0.136+3.874<.001.00634
UCECRPL35AP3 →+0.149+1.916.001<.00133
SKCMMFFP3 →+0.252+3.906<.001.00132
SKCMHDAC9-AS1 →+0.155+3.744<.001.00332
SKCMSAR1AP1 →+0.120+3.587<.001.00232
UCECDPY19L4P2 →+0.053+1.339.006.00532
Each partner links to its Q-omics profile. Showing the 6 strongest of 3,964 associations by consensus.

RN7SL134P by ACVR2A expression — CESC

Box plot of RN7SL134P in ACVR2A-low vs ACVR2A-high samples in CESC.

Explore this box plot interactively →

Exploration