ACRBP

protein abundance — cross-omics
Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, ACRBP protein abundance is significantly associated with the RNA expression of many other genes, with 11,161 significant associations in total. LSCC shows the largest number of these associations.

The most reproducible ACRBP-associated genes across cancer lineages are PTK7, LOXL1, and PLAAT2. Each is linked with ACRBP in more than 1 cancer types. Because this analysis shows association rather than direction, both ACRBP-to-partner and partner-to-ACRBP results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ACRBP versus PTK7 in GBM, with a Pearson correlation of 0.63.

protein abundance associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ACRBP→partner) and Y-score (partner→ACRBP) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMPTK7 →+1.063+0.873.009.00531
GBMLOXL1 →+1.883+0.873.001.00531
GBMPLAAT2 →+0.631+1.028.004<.00131
GBMB4GALNT3 →+1.616+0.873.006.00531
GBMZDHHC5 →+0.548+0.941.002.00631
GBMASGR2 →+1.010+1.028.002<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest of 11,161 associations by consensus.

ACRBP vs PTK7 — GBM

Per-sample scatter of ACRBP vs PTK7 in GBM (Pearson r = 0.63).

Explore this scatter interactively →

Exploration