ABCD3

Across TCGA cell cohorts, ABCD3 RNA expression is significantly associated with the RNA expression of many other genes, with 10,523 significant associations in total. BLOOD_Leukemia shows the largest number of these associations.

The most reproducible ABCD3-associated genes across cancer lineages are HS2ST1, PKN2, and TMED5. Each is linked with ABCD3 in more than 18 cancer types. Because this analysis shows association rather than direction, both ABCD3-to-partner and partner-to-ABCD3 results are reported.

Each partner links to its own Q-omics profile. The scatter plot shows the strongest example, ABCD3 versus HS2ST1 in OESOPHAGUS, with a Pearson correlation of 0.67.

RNA expression associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (ABCD3→partner) and Y-score (partner→ABCD3) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OESOPHAGUS	HS2ST1 →	+1.140	+1.013	.001	<.001	2	19
URINARY_TRACT	PKN2 →	+1.226	+1.606	<.001	<.001	3	18
LUNG_NSCLC_LUSC	TMED5 →	+1.362	+1.040	<.001	<.001	3	17
URINARY_TRACT	USP33 →	+1.110	+1.372	<.001	.004	3	17
UPPER_AERODIGESTIVE_TRACT	GLMN →	+1.529	+1.190	<.001	<.001	3	16
SOFT_TISSUE	ICMT →	+0.960	+0.753	<.001	<.001	3	16

Each partner links to its Q-omics profile. Showing the 6 strongest of 10,523 associations by consensus.

ABCD3 vs HS2ST1 — OESOPHAGUS

Explore this scatter interactively →