ABCA13

Across TCGA cell cohorts, ABCA13 RNA expression is significantly associated with the go_rna of many other GO terms, with 2,570 significant associations in total. BLOOD_Lymphoma shows the largest number of these associations.

The most reproducible ABCA13-associated GO terms across cancer lineages are Regulation of intracellular protein transport, Regulation of protein localization to nucleus, and Regulation of intracellular transport. Each is linked with ABCA13 in more than 9 cancer types. Because this analysis shows association rather than direction, both ABCA13-to-partner and partner-to-ABCA13 results are reported.

Each partner links to its own Q-omics profile. The box plot shows the strongest example, Regulation of intracellular protein transport grouped by ABCA13-low versus ABCA13-high in SOFT_TISSUE.

RNA expression associated GO terms by consensus

Ranked by combined sampling and lineage consensus. X-score (ABCA13→partner) and Y-score (partner→ABCA13) are standardized regression coefficients; both directions are reported because the association is undirected. p-values are from the association test.

Lineage	Partner GO term	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
SOFT_TISSUE	Regulation of intracellular protein transport →	+0.072	+0.443	<.001	.002	3	10
SKIN	Regulation of protein localization to nucleus →	+0.060	+0.699	<.001	.004	2	10
LUNG_NSCLC_LUAD	Regulation of intracellular transport →	+0.040	+0.836	<.001	.002	3	9
LUNG_NSCLC_LUAD	Negative regulation of protein catabolic process →	+0.056	+0.764	<.001	<.001	3	9
BLOOD_Lymphoma	Chaperone-mediated autophagy →	+0.100	+2.461	<.001	<.001	3	8
SKIN	Positive regulation of protein localization to nucleus →	+0.072	+0.768	<.001	.001	3	8

Each partner links to its Q-omics profile. Showing the 6 strongest of 2,570 associations by consensus.

Regulation of intracellular protein transport by ABCA13 expression — SOFT_TISSUE

Explore this box plot interactively →