VSP34_8731

response biomarkers — cross-omics
Drug responseDRUG → RNACell lineSN1049998399, VSP34_8731

Across CCLE and GDSC cell-line panels, response to VSP34_8731 is significantly associated with the RNA expression of multiple genes, with OVARY cell lines showing a particularly strong set of associations.

The most reproducible VSP34_8731 response-associated genes across cancer lineages are PPP1R15A, BCL6, and JUN, each associated with drug response in up to 8 lineages. Since the analysis identifies associations rather than directional relationships, both response-to-biomarker and biomarker-to-response views are provided.

Each biomarker is linked to its corresponding Q-omics profile. The scatter plot shows the strongest observed association, VSP34_8731 response versus PPP1R15A RNA expression in OVARY (Pearson r = -0.67).

Rna expression biomarkers of VSP34_8731 response

Ranked by combined sampling and lineage consensus. X-score (response→biomarker) and Y-score (biomarker→response) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYPPP1R15A →-1.670-0.856.009.01238
OVARYBCL6 →-1.829-0.614.007.00338
OVARYJUN →-2.507-0.839.031.04138
LUNG_SCLCFEM1C →-0.793-0.427<.001<.00137
LUNG_SCLCRNF182 →-1.769-0.363.018.01737
OESOPHAGUSNR1D2 →-0.808-0.566.017.02628
Each biomarker links to its Q-omics profile. Showing the 6 strongest associations by consensus.

VSP34_8731 response vs PPP1R15A — OVARY

Per-cell-line scatter of VSP34_8731 response vs PPP1R15A RNA expression in OVARY.

Explore this scatter interactively →

Exploration