Negative regulation of extrinsic apoptotic signaling pathway

pathway activity — cross-omics
GO:2001237Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of extrinsic apoptotic signaling pathway pathway is significantly associated with the protein abundance of multiple proteins, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TOP1, TUBB6, and ITGA5, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of extrinsic apoptotic signaling pathway activity versus TOP1 in OV (Pearson r = -0.37).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVTOP1 →-0.399-0.048<.001<.00136
OVTUBB6 →+0.359+0.041<.001<.00136
OVITGA5 →+0.801+0.068<.001<.00136
OVP4HA2 →+0.711+0.050<.001<.00136
OVLAMB1 →+0.425+0.036<.001<.00135
OVSERPINH1 →+0.667+0.054<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:2001237 vs TOP1 — OV

Per-sample scatter of Negative regulation of extrinsic apoptotic signaling pathway activity vs TOP1 in OV.

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Exploration