Positive regulation of apoptotic signaling pathway

pathway activity — cross-omics
GO:2001235Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of apoptotic signaling pathway pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are DCN, OLFML1, and WAS, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of apoptotic signaling pathway activity versus DCN in GBM (Pearson r = 0.35).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMDCN →+0.729+0.034<.001<.00139
BRCAOLFML1 →+0.931+0.043<.001<.00138
GBMWAS →+0.640+0.064<.001<.00138
GBMDPYD →+0.631+0.038<.001<.00138
GBMAIF1 →+0.772+0.055<.001<.00138
OVRTN1 →+0.442+0.028<.001<.00138
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:2001235 vs DCN — GBM

Per-sample scatter of Positive regulation of apoptotic signaling pathway activity vs DCN in GBM.

Explore this scatter interactively →

Exploration