Positive regulation of cytoplasmic translation

pathway activity — cross-omics
GO:2000767Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of cytoplasmic translation pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are UCHL1, ZCCHC24, and QKI, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of cytoplasmic translation activity versus UCHL1 in BRCA (Pearson r = 0.36).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAUCHL1 →+1.201+0.066<.001<.00136
LUADZCCHC24 →+0.275+0.055.001.00136
BRCAQKI →+0.268+0.049<.001<.00136
CCRCCSPAG9_S251 →-0.428-0.049<.001<.00136
CCRCCCACNA2D1 →+0.394+0.048<.001<.00136
UCECJPT2 →-0.470-0.152<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:2000767 vs UCHL1 — BRCA

Per-sample scatter of Positive regulation of cytoplasmic translation activity vs UCHL1 in BRCA.

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Exploration