Positive regulation of miRNA metabolic process

pathway activity — cross-omics
GO:2000630Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of miRNA metabolic process pathway is significantly associated with the RNA expression of multiple genes, with the UPPER_AERODIGESTIVE_TRACT cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are STARD10, ZMAT3, and B9D2, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, STARD10 grouped by Positive regulation of miRNA metabolic process-low versus -high activity in UPPER_AERODIGESTIVE_TRACT.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTSTARD10 →+1.706+0.204.002.00235
LARGE_INTESTINEZMAT3 →-1.029-0.212.002.00234
LUNG_NSCLC_LUADB9D2 →-0.652-0.168.002.00734
LUNG_NSCLC_LUADRILPL2 →-0.774-0.197.001<.00134
LUNG_NSCLC_LUADCDH1 →+1.804+0.150.007.00134
LARGE_INTESTINETIFA →-1.332-0.222<.001.00333
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

STARD10 by Positive regulation of miRNA metabolic process activity — UPPER_AERODIGESTIVE_TRACT

Box plot of STARD10 in Positive regulation of miRNA metabolic process-low vs -high samples in UPPER_AERODIGESTIVE_TRACT.

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Exploration