Positive regulation of T-helper 2 cell cytokine production

pathway activity — cross-omics
GO:2000553Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of T-helper 2 cell cytokine production pathway is significantly associated with the protein abundance of multiple proteins, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are CORO1A, AMPD3, and SKAP2, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of T-helper 2 cell cytokine production activity versus CORO1A in UCEC (Pearson r = 0.36).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECCORO1A →+0.517+0.066<.001<.00138
OVAMPD3 →+0.456+0.063.001<.00138
HNSCSKAP2 →+0.441+0.055<.001.00337
UCECSTX11 →+0.849+0.079<.001<.00137
LSCCUNC13D →+0.489+0.080<.001<.00137
COADDMXL2 →+0.435+0.040.001.00137
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:2000553 vs CORO1A — UCEC

Per-sample scatter of Positive regulation of T-helper 2 cell cytokine production activity vs CORO1A in UCEC.

Explore this scatter interactively →

Exploration