Positive regulation of lymphocyte migration

pathway activity — cross-omics
GO:2000403Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of lymphocyte migration pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MEI1, CD274, and TRAV4, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of lymphocyte migration activity versus MEI1 in BRCA (Pearson r = 0.25).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAMEI1 →+0.656+0.298<.001<.00136
BRCACD274 →+1.109+0.360<.001<.00135
BRCATRAV4 →+0.776+0.178<.001<.00135
BRCAARHGAP9 →+0.675+0.199<.001<.00135
BRCAIGLJ2 →+1.096+0.208<.001<.00135
OVEBPL →-0.676-0.269.002.00734
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:2000403 vs MEI1 — BRCA

Per-sample scatter of Positive regulation of lymphocyte migration activity vs MEI1 in BRCA.

Explore this scatter interactively →

Exploration