Negative regulation of lymphocyte migration

Across TCGA cell cohorts, RNA activity of the Negative regulation of lymphocyte migration pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_SCLC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CD9, CREB3L1, and FUBP3, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of lymphocyte migration activity versus CD9 in LUNG_SCLC (Pearson r = -0.46).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
LUNG_SCLC	CD9 →	-2.601	-0.758	.002	<.001	3	5
KIDNEY	CREB3L1 →	+2.172	+1.481	.004	.001	3	4
BREAST	FUBP3 →	-0.632	-1.251	<.001	<.001	3	4
LUNG_SCLC	ZNF516 →	+2.561	+1.022	.001	.005	3	4
LUNG_SCLC	FOXA1 →	+3.219	+1.021	.001	.002	3	4
LUNG_SCLC	LRCH1 →	-1.155	-0.695	.002	.002	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:2000402 vs CD9 — LUNG_SCLC

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