Regulation of CD40 signaling pathway

Across TCGA patient cohorts, RNA activity of the Regulation of CD40 signaling pathway pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are RN7SL487P, ACTG1P16, and SPC25, each associated with the pathway in up to 3 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of CD40 signaling pathway activity versus RN7SL487P in OV (Pearson r = 0.31).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	RN7SL487P →	+0.268	+0.638	<.001	.001	3	3
OV	ACTG1P16 →	+0.162	+0.698	.003	.002	3	3
HNSC	SPC25 →	+0.793	+0.514	.001	.003	3	3
HNSC	E2F7 →	+0.771	+0.431	.003	.004	3	3
UCEC	F10 →	-0.670	-0.589	<.001	.004	3	3
UCEC	ATOH8 →	-0.887	-0.961	.002	<.001	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:2000348 vs RN7SL487P — OV

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