Positive regulation of hepatocyte proliferation

pathway activity — cross-omics
GO:2000347Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of hepatocyte proliferation pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_NSCLC_LUSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CHTF8, REEP1, and THAP11, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, CHTF8 grouped by Positive regulation of hepatocyte proliferation-low versus -high activity in LUNG_NSCLC_LUSC.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUSCCHTF8 →+0.721+1.037.003.00735
OESOPHAGUSREEP1 →-1.530-1.378.004.00334
LUNG_NSCLC_LUSCTHAP11 →+0.744+1.254.003.00334
SKINSORL1 →-1.445-1.042.007.00225
SKINERAP2 →+1.594+0.835<.001.00334
URINARY_TRACTWDR53 →+0.448+0.241.002<.00133
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

CHTF8 by Positive regulation of hepatocyte proliferation activity — LUNG_NSCLC_LUSC

Box plot of CHTF8 in Positive regulation of hepatocyte proliferation-low vs -high samples in LUNG_NSCLC_LUSC.

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Exploration