Positive regulation of T-helper 17 cell differentiation

pathway activity — cross-omics
GO:2000321Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of T-helper 17 cell differentiation pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are ARHGAP25, ARHGAP25_S363, and PSTPIP2, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of T-helper 17 cell differentiation activity versus ARHGAP25 in BRCA (Pearson r = 0.18).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAARHGAP25 →+0.512+0.054<.001<.00137
CCRCCARHGAP25_S363 →+0.573+0.081.001<.00137
GBMPSTPIP2 →+0.561+0.078<.001<.00137
BRCASERPINB9 →+0.631+0.063<.001<.00136
GBMAIF1 →+0.713+0.091<.001<.00136
BRCALCP2 →+0.584+0.058<.001<.00136
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:2000321 vs ARHGAP25 — BRCA

Per-sample scatter of Positive regulation of T-helper 17 cell differentiation activity vs ARHGAP25 in BRCA.

Explore this scatter interactively →

Exploration