Negative regulation of ubiquitin-dependent protein catabolic process

pathway activity — cross-omics
GO:2000059Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of ubiquitin-dependent protein catabolic process pathway is significantly associated with the protein abundance of multiple proteins, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are POGZ, OGT, and RIF1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of ubiquitin-dependent protein catabolic process activity versus POGZ in HNSC (Pearson r = 0.25).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCPOGZ →+0.301+0.070<.001.00436
OVOGT →+0.202+0.027.008.00935
LSCCRIF1 →+0.373+0.032.004.00135
HNSCWRNIP1 →+0.288+0.063.001.00235
LSCCDHX8 →+0.201+0.029.003<.00135
HNSCC1orf35 →+0.411+0.079<.001.00735
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:2000059 vs POGZ — HNSC

Per-sample scatter of Negative regulation of ubiquitin-dependent protein catabolic process activity vs POGZ in HNSC.

Explore this scatter interactively →

Exploration