Negative regulation of calcium ion import across plasma membrane

Across TCGA patient cohorts, RNA activity of the Negative regulation of calcium ion import across plasma membrane pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are CNRIP1, FKBP7, and VIM_S430, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of calcium ion import across plasma membrane activity versus CNRIP1 in GBM (Pearson r = 0.46).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
GBM	CNRIP1 →	+0.531	+0.065	<.001	.001	3	7
OV	FKBP7 →	+0.557	+0.095	.001	<.001	3	7
COAD	VIM_S430 →	+0.334	+0.055	<.001	<.001	3	6
OV	RCN3 →	+0.414	+0.070	.005	.001	3	6
BRCA	DPYSL3 →	+0.479	+0.061	.001	.001	3	6
CCRCC	COL3A1 →	+1.048	+0.075	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1905949 vs CNRIP1 — GBM

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