Positive regulation of vascular associated smooth muscle cell differentiation

Across TCGA patient cohorts, RNA activity of the Positive regulation of vascular associated smooth muscle cell differentiation pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are S100A12, PCARE, and CXCR2, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of vascular associated smooth muscle cell differentiation activity versus S100A12 in OV (Pearson r = 0.38).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	S100A12 →	+0.791	+0.255	<.001	.001	3	4
LUAD	PCARE →	+0.196	+0.130	.004	.003	3	4
PDAC	CXCR2 →	+0.985	+0.142	<.001	.002	3	4
PDAC	FCAR →	+0.797	+0.177	<.001	<.001	3	4
PDAC	SOD2 →	+0.635	+0.138	.002	.006	3	4
OV	CSF3R →	+0.679	+0.245	.001	.002	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1905065 vs S100A12 — OV

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