Positive regulation of vascular associated smooth muscle cell migration

pathway activity — cross-omics
GO:1904754Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of vascular associated smooth muscle cell migration pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are EFEMP2, ACTA2, and SULF1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of vascular associated smooth muscle cell migration activity versus EFEMP2 in OV (Pearson r = 0.28).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVEFEMP2 →+0.767+0.889.007.00235
COADACTA2 →+0.674+0.214.001.00135
HNSCSULF1 →+1.058+0.758.001.00526
BRCAC5orf46 →+1.385+0.611<.001<.00135
HNSCDNM1P51 →+0.360+0.724.007.00334
BRCASUGCT →+0.887+0.597<.001.00434
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1904754 vs EFEMP2 — OV

Per-sample scatter of Positive regulation of vascular associated smooth muscle cell migration activity vs EFEMP2 in OV.

Explore this scatter interactively →

Exploration