Regulation of epithelial cell apoptotic process

Across TCGA patient cohorts, RNA activity of the Regulation of epithelial cell apoptotic process pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are HLX, NFATC2, and SERPING1, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of epithelial cell apoptotic process activity versus HLX in BRCA (Pearson r = 0.19).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	HLX →	+0.384	+0.287	<.001	<.001	3	8
GBM	NFATC2 →	+0.524	+0.134	.002	.001	3	6
BRCA	SERPING1 →	+0.672	+0.149	<.001	.001	3	6
LUAD	JAML →	+0.896	+0.153	<.001	.001	3	6
BRCA	SRPX →	+0.984	+0.215	<.001	<.001	3	5
BRCA	LILRA1 →	+0.398	+0.227	<.001	<.001	3	5

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1904035 vs HLX — BRCA

Explore this scatter interactively →