Negative regulation of glial cell migration

Across TCGA patient cohorts, RNA activity of the Negative regulation of glial cell migration pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PIK3CD, ARHGAP9, and OMG, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of glial cell migration activity versus PIK3CD in BRCA (Pearson r = -0.03).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	PIK3CD →	-0.805	-0.610	.001	.006	3	4
LSCC	ARHGAP9 →	-0.427	-0.157	.005	.003	3	4
HNSC	OMG →	+0.791	+0.380	<.001	.003	3	3
GBM	NF1 →	+0.584	+0.253	<.001	.001	2	4
LUAD	VSIR →	-0.476	-0.380	.007	.004	3	3
LSCC	PSTPIP1 →	-0.516	-0.149	.002	.009	3	3

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1903976 vs PIK3CD — BRCA

Explore this scatter interactively →