Positive regulation of miRNA processing

pathway activity — cross-omics
GO:1903800Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of miRNA processing pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_NSCLC_LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are TRUB1, RCBTB1, and UROS, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of miRNA processing activity versus TRUB1 in LUNG_NSCLC_LUAD (Pearson r = 0.75).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_NSCLC_LUADTRUB1 →+0.812+0.360.006<.00138
SKINRCBTB1 →+0.711+0.250.001.00634
SKINUROS →+0.578+0.395.005.00134
STOMACHRAD54L2 →+1.166+0.579<.001.00134
LARGE_INTESTINEEDRF1 →+1.351+0.348.002.00834
LUNG_NSCLC_LUADGSTO2 →+3.293+0.472<.001.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1903800 vs TRUB1 — LUNG_NSCLC_LUAD

Per-sample scatter of Positive regulation of miRNA processing activity vs TRUB1 in LUNG_NSCLC_LUAD.

Explore this scatter interactively →

Exploration