Negative regulation of phospholipid metabolic process

Across TCGA patient cohorts, RNA activity of the Negative regulation of phospholipid metabolic process pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are RPL5, SORBS3, and SEPTIN4, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of phospholipid metabolic process activity versus RPL5 in BRCA (Pearson r = 0.20).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	RPL5 →	-0.236	-0.074	<.001	<.001	3	9
OV	SORBS3 →	+0.372	+0.065	.004	.001	3	8
GBM	SEPTIN4 →	+0.583	+0.055	<.001	<.001	3	8
BRCA	PRKG1 →	+0.493	+0.061	<.001	<.001	3	8
LUAD	PLAC9 →	+0.668	+0.061	<.001	.001	3	8
COAD	BGN →	+0.657	+0.049	.004	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1903726 vs RPL5 — BRCA

Explore this scatter interactively →