Regulation of sprouting angiogenesis

Across TCGA patient cohorts, RNA activity of the Regulation of sprouting angiogenesis pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are JAM3, EDNRA, and JCAD, each associated with the pathway in up to 8 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of sprouting angiogenesis activity versus JAM3 in BRCA (Pearson r = 0.30).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	JAM3 →	+0.942	+0.620	<.001	<.001	3	8
CCRCC	EDNRA →	+0.984	+0.439	<.001	.006	3	7
LSCC	JCAD →	+0.950	+1.158	<.001	<.001	3	7
BRCA	ENOX1 →	+0.657	+0.560	.001	<.001	3	7
BRCA	EDA2R →	+0.944	+0.578	<.001	<.001	3	7
OV	FKBP7 →	+0.909	+1.355	<.001	<.001	3	7

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1903670 vs JAM3 — BRCA

Explore this scatter interactively →