Negative regulation of ATP metabolic process

pathway activity — cross-omics
GO:1903579Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of ATP metabolic process pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are SLIT3, THBS3, and NID2, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of ATP metabolic process activity versus SLIT3 in BRCA (Pearson r = -0.08).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCASLIT3 →+0.428+0.035<.001.00436
PDACTHBS3 →+0.268+0.041.001.00236
BRCANID2 →+0.339+0.033<.001<.00136
LSCCCOL14A1 →+0.787+0.078<.001<.00136
LSCCOLFML1 →+0.378+0.060.002.00136
PDACSPON1 →+0.641+0.056<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1903579 vs SLIT3 — BRCA

Per-sample scatter of Negative regulation of ATP metabolic process activity vs SLIT3 in BRCA.

Explore this scatter interactively →

Exploration