Negative regulation of ATP metabolic process

pathway activity — cross-omics
GO:1903579Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Negative regulation of ATP metabolic process pathway is significantly associated with the RNA expression of multiple genes, with the UPPER_AERODIGESTIVE_TRACT cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are KIF11, SHCBP1, and RNF182, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, KIF11 grouped by Negative regulation of ATP metabolic process-low versus -high activity in UPPER_AERODIGESTIVE_TRACT.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UPPER_AERODIGESTIVE_TRACTKIF11 →-1.716-0.366.002<.00134
SKINSHCBP1 →-0.694-0.803.003.00834
URINARY_TRACTRNF182 →-2.724-0.429.008.00934
UPPER_AERODIGESTIVE_TRACTSTIL →-1.480-0.401.004<.00134
UPPER_AERODIGESTIVE_TRACTRPP30 →-1.091-0.387.003<.00134
UPPER_AERODIGESTIVE_TRACTFAM204A →-0.931-0.399.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

KIF11 by Negative regulation of ATP metabolic process activity — UPPER_AERODIGESTIVE_TRACT

Box plot of KIF11 in Negative regulation of ATP metabolic process-low vs -high samples in UPPER_AERODIGESTIVE_TRACT.

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Exploration