Positive regulation of protein localization to cilium

Across TCGA patient cohorts, RNA activity of the Positive regulation of protein localization to cilium pathway is significantly associated with the protein abundance of multiple proteins, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are TNS2_S102, HDGFL3, and CNRIP1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of protein localization to cilium activity versus TNS2_S102 in BRCA (Pearson r = 0.20).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner protein	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
BRCA	TNS2_S102 →	+0.657	+0.038	<.001	.003	3	7
UCEC	HDGFL3 →	+0.646	+0.065	<.001	.003	3	7
GBM	CNRIP1 →	+0.672	+0.055	<.001	.001	3	7
HNSC	ARFGEF1 →	-0.220	-0.066	<.001	<.001	3	7
COAD	SORBS1 →	+0.618	+0.035	<.001	<.001	3	6
PDAC	PHLDB1_S404 →	+0.368	+0.041	<.001	<.001	3	6

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1903566 vs TNS2_S102 — BRCA

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