Positive regulation of protein localization to cilium

pathway activity — cross-omics
GO:1903566Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of protein localization to cilium pathway is significantly associated with the RNA expression of multiple genes, with the OVARY cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CSK, RNF166, and RASL10A, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of protein localization to cilium activity versus CSK in OVARY (Pearson r = -0.71).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYCSK →-0.985-1.539<.001.00234
OVARYRNF166 →-1.001-1.539.001.00233
BLOOD_LeukemiaRASL10A →-0.745-0.837.007.00533
BLOOD_LeukemiaHCST →-3.130-1.432.009<.00133
OVARYBIK →+2.123+1.539.005.00232
OVARYACD →-1.468-1.539.003.00232
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1903566 vs CSK — OVARY

Per-sample scatter of Positive regulation of protein localization to cilium activity vs CSK in OVARY.

Explore this scatter interactively →

Exploration