Negative regulation of leukocyte cell-cell adhesion

pathway activity — cross-omics
GO:1903038Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Negative regulation of leukocyte cell-cell adhesion pathway is significantly associated with the RNA expression of multiple genes, with the OVARY cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CSNK1G2, WDR76, and EPCAM, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Negative regulation of leukocyte cell-cell adhesion activity versus CSNK1G2 in OVARY (Pearson r = 0.42).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
OVARYCSNK1G2 →+0.563+0.351.002<.00136
UPPER_AERODIGESTIVE_TRACTWDR76 →+1.122+0.266.001.00236
BLOOD_LeukemiaEPCAM →-1.704-0.149.004.00236
URINARY_TRACTDSC2 →-3.990-0.716.002<.00136
UPPER_AERODIGESTIVE_TRACTMFAP1 →+0.644+0.269.001.00136
BREASTUQCRC1 →+0.568+0.196<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1903038 vs CSNK1G2 — OVARY

Per-sample scatter of Negative regulation of leukocyte cell-cell adhesion activity vs CSNK1G2 in OVARY.

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Exploration