Positive regulation of response to wounding

pathway activity — cross-omics
GO:1903036Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of response to wounding pathway is significantly associated with the RNA expression of multiple genes, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are MYL9, ACTA2, and CNN1, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of response to wounding activity versus MYL9 in UCEC (Pearson r = 0.31).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECMYL9 →+1.473+0.325<.001<.00139
UCECACTA2 →+1.514+0.288.008.00139
UCECCNN1 →+1.727+0.221.001<.00139
UCECACTG2 →+2.215+0.286.003.00139
UCECLMOD1 →+1.762+0.259<.001<.00139
UCECMSRB3 →+1.355+0.379<.001<.00139
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1903036 vs MYL9 — UCEC

Per-sample scatter of Positive regulation of response to wounding activity vs MYL9 in UCEC.

Explore this scatter interactively →

Exploration