Positive regulation of opsonization

pathway activity — cross-omics
GO:1903028Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of opsonization pathway is significantly associated with the RNA expression of multiple genes, with the BLOOD_Lymphoma cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CASP3, ACY3, and PIK3CD, each associated with the pathway in up to 2 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of opsonization activity versus CASP3 in BLOOD_Lymphoma (Pearson r = 0.71).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LymphomaCASP3 →+1.080+1.406.002.00232
BLOOD_LeukemiaACY3 →+2.420+1.806<.001<.00132
BLOOD_LeukemiaPIK3CD →+2.033+1.972<.001.00132
BLOOD_LeukemiaRHOG →-1.190-1.841.009<.00132
BREASTGRAP2 →+0.963+1.570.002<.00131
BREASTAADAT →+3.043+1.503<.001<.00131
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1903028 vs CASP3 — BLOOD_Lymphoma

Per-sample scatter of Positive regulation of opsonization activity vs CASP3 in BLOOD_Lymphoma.

Explore this scatter interactively →

Exploration