Positive regulation of protein monoubiquitination

pathway activity — cross-omics
GO:1902527Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of protein monoubiquitination pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are NOP9, EFTUD2, and KRT23_S61, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of protein monoubiquitination activity versus NOP9 in GBM (Pearson r = -0.49).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMNOP9 →-0.388-0.062<.001<.00135
GBMEFTUD2 →-0.213-0.043.001<.00135
LUADKRT23_S61 →+1.810+0.046.002.00234
BRCAPRICKLE1_S683 →+0.587+0.039<.001<.00134
OVSF3B3 →-0.180-0.056.004.00734
GBMSSRP1 →-0.384-0.038<.001<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1902527 vs NOP9 — GBM

Per-sample scatter of Positive regulation of protein monoubiquitination activity vs NOP9 in GBM.

Explore this scatter interactively →

Exploration