Regulation of intrinsic apoptotic signaling pathway in response to DNA damage

pathway activity — cross-omics
GO:1902229Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of intrinsic apoptotic signaling pathway in response to DNA damage pathway is significantly associated with the RNA expression of multiple genes, with the UCEC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are OLR1, TREM1, and LINC02084, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of intrinsic apoptotic signaling pathway in response to DNA damage activity versus OLR1 in UCEC (Pearson r = -0.15).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
UCECOLR1 →-0.981-0.132<.001<.00134
LSCCTREM1 →-1.061-0.150<.001<.00134
OVLINC02084 →+0.529+0.164<.001<.00133
COADDUSP26 →-0.263-0.092.005.00533
COADRN7SL594P →+0.181+0.119.006.00933
COADSNX24 →+0.407+0.118.006.00233
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1902229 vs OLR1 — UCEC

Per-sample scatter of Regulation of intrinsic apoptotic signaling pathway in response to DNA damage activity vs OLR1 in UCEC.

Explore this scatter interactively →

Exploration