Regulation of extrinsic apoptotic signaling pathway via death domain receptors

pathway activity — cross-omics
GO:1902041Cross-omicsSHRNA → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Regulation of extrinsic apoptotic signaling pathway via death domain receptors pathway is significantly associated with the RNA expression of multiple genes, with the PANCREAS cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are EPSTI1, RTP4, and GIMAP2, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The box plot shows the strongest association, EPSTI1 grouped by Regulation of extrinsic apoptotic signaling pathway via death domain receptors-low versus -high activity in PANCREAS.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
PANCREASEPSTI1 →+1.898+0.689<.001.00435
PANCREASRTP4 →+1.355+0.665.002.00634
LARGE_INTESTINEGIMAP2 →+1.597+0.634<.001.00934
LARGE_INTESTINEAREG →+2.998+1.099.009.00234
BLOOD_LeukemiaSLK →+1.242+1.029.001.00834
BLOOD_LeukemiaTMED2 →+0.781+1.468.007<.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

EPSTI1 by Regulation of extrinsic apoptotic signaling pathway via death domain receptors activity — PANCREAS

Box plot of EPSTI1 in Regulation of extrinsic apoptotic signaling pathway via death domain receptors-low vs -high samples in PANCREAS.

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