Regulation of hematopoietic stem cell proliferation

pathway activity — cross-omics
GO:1902033Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Regulation of hematopoietic stem cell proliferation pathway is significantly associated with the RNA expression of multiple genes, with the BLOOD_Myeloma cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are EXOSC2, HERC5, and OTUD1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of hematopoietic stem cell proliferation activity versus EXOSC2 in BLOOD_Myeloma (Pearson r = 0.84).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_MyelomaEXOSC2 →+0.752+1.727<.001.00135
BLOOD_MyelomaHERC5 →+3.022+1.727<.001.00135
BLOOD_MyelomaOTUD1 →+1.170+2.011.005<.00126
BLOOD_MyelomaOLA1 →+0.908+1.727.001.00134
BLOOD_MyelomaCENPE →+1.303+2.005.006<.00134
BLOOD_MyelomaACOT7 →+1.975+1.727.002.00134
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1902033 vs EXOSC2 — BLOOD_Myeloma

Per-sample scatter of Regulation of hematopoietic stem cell proliferation activity vs EXOSC2 in BLOOD_Myeloma.

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Exploration