Regulation of cell proliferation involved in kidney development

pathway activity — cross-omics
GO:1901722Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of cell proliferation involved in kidney development pathway is significantly associated with the RNA expression of multiple genes, with the LUAD cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are PXDN, PTGER3, and OR7E100P, each associated with the pathway in up to 4 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUADPXDN →+0.634+0.261<.001.00334
OVPTGER3 →+0.942+0.576<.001.00534
BRCAOR7E100P →-0.078-0.366.006.00433
GBMCD36 →+0.565+0.314.007.00633
LUADIFFO1 →+0.344+0.311.002.00933
LUADNCF1B →+0.387+0.365.006.00533
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration