Positive regulation of store-operated calcium channel activity

pathway activity — cross-omics
GO:1901341Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Positive regulation of store-operated calcium channel activity pathway is significantly associated with the RNA expression of multiple genes, with the BONE cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are NDUFS2, ITGB1, and ISYNA1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of store-operated calcium channel activity activity versus NDUFS2 in BONE (Pearson r = -0.84).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BONENDUFS2 →-1.229-1.953.002<.00136
BONEITGB1 →+2.069+1.504.004.00636
BONEISYNA1 →-3.463-1.620<.001<.00135
BONESALL2 →-4.886-1.851<.001<.00135
BONEPSORS1C1 →+2.105+1.988<.001<.00135
OVARYWDCP →-0.875-0.385<.001.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1901341 vs NDUFS2 — BONE

Per-sample scatter of Positive regulation of store-operated calcium channel activity activity vs NDUFS2 in BONE.

Explore this scatter interactively →

Exploration