Regulation of store-operated calcium channel activity

pathway activity — cross-omics
GO:1901339Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Regulation of store-operated calcium channel activity pathway is significantly associated with the protein abundance of multiple proteins, with the LSCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are STIM2, CEBPZ, and CPSF1, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of store-operated calcium channel activity activity versus STIM2 in LSCC (Pearson r = 0.66).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LSCCSTIM2 →+0.356+0.089<.001<.00136
LSCCCEBPZ →-0.215-0.056.008<.00135
CCRCCCPSF1 →-0.073-0.050.007.00435
UCECHEATR1 →-0.265-0.082.002.00235
OVSTIM1 →+0.559+0.077<.001<.00135
UCECRTF2 →-0.275-0.084.009.00834
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1901339 vs STIM2 — LSCC

Per-sample scatter of Regulation of store-operated calcium channel activity activity vs STIM2 in LSCC.

Explore this scatter interactively →

Exploration