Negative regulation of extracellular matrix assembly

pathway activity — cross-omics
GO:1901202Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Negative regulation of extracellular matrix assembly pathway is significantly associated with the RNA expression of multiple genes, with the CCRCC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are ANTXR1, SPARC, and PRRX1, each associated with the pathway in up to 9 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
CCRCCANTXR1 →+1.179+0.331<.001<.00139
COADSPARC →+1.133+0.107.004.00128
COADPRRX1 →+1.094+0.100<.001.00137
COADCOL10A1 →+2.001+0.097<.001<.00137
COADPLA2G5 →+0.536+0.083<.001<.00137
LSCCZNF365 →+0.632+0.111.004.00237
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration