Positive regulation of calcium ion transmembrane transporter activity

pathway activity — cross-omics
GO:1901021Cross-omicsPROTEIN-MS → RNAPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of calcium ion transmembrane transporter activity pathway is significantly associated with the RNA expression of multiple genes, with the BRCA cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are EMCN, NUP155, and S1PR1, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BRCAEMCN →+0.490+0.525.003.00235
LSCCNUP155 →-0.525-0.404<.001.00135
GBMS1PR1 →+0.612+1.005<.001<.00135
LSCCCENPL →-0.461-0.278<.001.00435
GBMIRAG1 →+0.711+0.980.003<.00135
LSCCAPH1A →-0.347-0.344.003.00335
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration