Obsolete regulation of dosage compensation by inactivation of X chromosome

pathway activity — cross-omics
GO:1900095Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Obsolete regulation of dosage compensation by inactivation of X chromosome pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are BRD3, DOCK11, and HCFC1, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMBRD3 →+0.251+0.064<.001<.00137
LSCCDOCK11 →+0.269+0.030<.001.00636
PDACHCFC1 →+0.155+0.044<.001<.00136
GBMRPL26 →-0.603-0.072.001.00336
GBMGLYR1 →+0.308+0.082<.001<.00136
BRCAVCAN →+0.795+0.034<.001.00235
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

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