Positive regulation of G1/S transition of mitotic cell cycle

pathway activity — tumor vs normal
GO:1900087Tumor vs NormalRNA activityBox plot · TCGA cohorts

Across TCGA pan-cancer cohorts, RNA activity of the Positive regulation of G1/S transition of mitotic cell cycle pathway differs between tumor and matched normal tissue in 10 of the 18 cancer types tested.

The strongest signal is observed in head and neck squamous cell carcinoma (HNSC), where pathway activity is higher in tumor tissue than in matched normal tissue. In most cancer types, this pathway shows higher activity in tumors, although a few cancer types, such as THCA and LUSC, show the opposite pattern, with lower activity in tumor tissue.

HNSC, KIRC, and KIRP show the most reproducible tumor–normal differences in pathway activity.

Tumor vs normal pathway activity by lineage

Ranked by sampling consensus. Activity change represents the tumor-versus-normal difference in pathway activity on a log2 scale. Positive values indicate higher pathway activity in tumor tissue. The reported p-values are derived from the corresponding differential activity tests.
LineageGenderStageActivity changepSampling consensus
HNSCFemaleAll+0.032<.00112view →
KIRCAllAll+0.029<.00111view →
KIRPAllAll+0.039<.0019view →
THCAAllII,III,IV−0.024.0047view →
LUSCMaleAll−0.027<.0016view →
LUADFemaleII,III,IV−0.048<.0015view →
LIHCAllAll−0.021<.0015view →
READAllIII,IV+0.034.0192view →
BRCAFemaleAll−0.009.0362view →
COADFemaleIII,IV+0.022.0081view →
Pink = more active in tumor, green = less active in tumor. Showing the 10 strongest of 10 lineages.

GO:1900087–HNSC

Tumor-vs-normal pathway-activity box plot for Positive regulation of G1/S transition of mitotic cell cycle in HNSC.

Open the HNSC breakdown →

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