Positive regulation of dendrite development

pathway activity — cross-omics
GO:1900006Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Positive regulation of dendrite development pathway is significantly associated with the protein abundance of multiple proteins, with the HNSC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are AIF1, FCER1G, and HCK, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Positive regulation of dendrite development activity versus AIF1 in HNSC (Pearson r = -0.30).

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
HNSCAIF1 →-0.517-0.089<.001.00137
UCECFCER1G →-0.671-0.056.003.00636
LSCCHCK →-0.453-0.088<.001.00136
UCECPKP4 →+0.452+0.100<.001<.00136
HNSCPTPRC →-0.586-0.095<.001<.00136
GBMRGS10 →-0.401-0.051.003.00727
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:1900006 vs AIF1 — HNSC

Per-sample scatter of Positive regulation of dendrite development activity vs AIF1 in HNSC.

Explore this scatter interactively →

Exploration