Reactive gliosis

pathway activity — cross-omics
GO:0150103Cross-omicsRNA → PROTEIN-MSPatientPairwise association · TCGA cohorts

Across TCGA patient cohorts, RNA activity of the Reactive gliosis pathway is significantly associated with the protein abundance of multiple proteins, with the GBM cohort showing a particularly strong set of associations.

The most reproducible pathway-associated proteins across cancer lineages are OTUD4_S893, PRPF4B_S368, and UBE2L6, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile.

Pathway-associated proteins by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner proteinX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
GBMOTUD4_S893 →-0.401-0.058.001.00136
OVPRPF4B_S368 →-0.750-0.027.002.00836
HNSCUBE2L6 →-0.452-0.054.002<.00136
GBMSEH1L →-0.168-0.057<.001<.00135
HNSCBAG6_S973 →-0.195-0.038<.001.00535
GBMUBR5_S1549 →-0.476-0.050<.001.00535
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

Exploration