Mitotic nuclear division

pathway activity — cross-omics
GO:0140014Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Mitotic nuclear division pathway is significantly associated with the RNA expression of multiple genes, with the LUNG_SCLC cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are CAVIN4, STMN1, and ZBTB12, each associated with the pathway in up to 7 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Mitotic nuclear division activity versus CAVIN4 in LUNG_SCLC (Pearson r = 0.57).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
LUNG_SCLCCAVIN4 →+1.094+0.147<.001<.00137
BLOOD_LeukemiaSTMN1 →+1.169+0.228<.001.00937
BLOOD_LymphomaZBTB12 →+1.021+0.185.001<.00136
BLOOD_LymphomaUHRF1 →+1.549+0.200<.001<.00135
BLOOD_LymphomaNCBP1 →+0.643+0.145.007.00235
BLOOD_LeukemiaRECQL →+1.009+0.173<.001<.00135
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0140014 vs CAVIN4 — LUNG_SCLC

Per-sample scatter of Mitotic nuclear division activity vs CAVIN4 in LUNG_SCLC.

Explore this scatter interactively →

Exploration