Regulation of glutamate receptor clustering

Across TCGA patient cohorts, RNA activity of the Regulation of glutamate receptor clustering pathway is significantly associated with the RNA expression of multiple genes, with the OV cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are COPZ2, PI4K2A, and SRPX2, each associated with the pathway in up to 5 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of glutamate receptor clustering activity versus COPZ2 in OV (Pearson r = 0.34).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.

Lineage	Partner gene	X-score	Y-score	p(X)	p(Y)	Sampling consensus	Lineage consensus
OV	COPZ2 →	+1.262	+0.929	.002	<.001	3	5
UCEC	PI4K2A →	+0.373	+0.334	.002	.005	3	5
OV	SRPX2 →	+0.911	+0.805	.004	.001	3	4
LUAD	PLAU →	+0.851	+0.640	.007	.001	3	4
LUAD	IMPA2 →	-1.010	-0.663	<.001	<.001	3	4
LUAD	TREML1 →	+0.339	+0.620	.001	<.001	3	4

Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0106104 vs COPZ2 — OV

Explore this scatter interactively →