Regulation of cellular response to osmotic stress

pathway activity — cross-omics
GO:0106049Cross-omicsPROTEIN-MS → RNACellPairwise association · TCGA cohorts

Across TCGA cell cohorts, RNA activity of the Regulation of cellular response to osmotic stress pathway is significantly associated with the RNA expression of multiple genes, with the BLOOD_Leukemia cohort showing a particularly strong set of associations.

The most reproducible pathway-associated genes across cancer lineages are DIMT1, SPPL2A, and PFDN2, each associated with the pathway in up to 6 cancer types. Since the analysis shows associations rather than directional relationships, both pathway-to-partner and partner-to-pathway views are reported.

Each partner is linked to its corresponding Q-omics profile. The scatter plot shows the strongest association, Regulation of cellular response to osmotic stress activity versus DIMT1 in BLOOD_Leukemia (Pearson r = 0.35).

Pathway-associated genes by consensus

Ranked by combined sampling and lineage consensus. X-score (pathway→partner) and Y-score (partner→pathway) are standardized regression coefficients; both directions are reported because the association is undirected. The reported p-values are derived from the association test.
LineagePartner geneX-scoreY-scorep(X)p(Y)Sampling consensusLineage consensus
BLOOD_LeukemiaDIMT1 →+0.705+0.230.002.00436
LUNG_SCLCSPPL2A →-1.044-0.277<.001<.00135
STOMACHPFDN2 →+1.061+0.303.003.00335
STOMACHH3C6 →-1.535-0.210.002.00635
PANCREASYWHAE →+0.876+0.343.002.00234
OVARYP3H3 →+3.063+0.262<.001.00534
Each partner links to its Q-omics profile. Showing the 6 strongest associations by consensus.

GO:0106049 vs DIMT1 — BLOOD_Leukemia

Per-sample scatter of Regulation of cellular response to osmotic stress activity vs DIMT1 in BLOOD_Leukemia.

Explore this scatter interactively →

Exploration